Biography
My research focus is the cancer phylogenetics. I develop computational methods to infer clones and the evolutionary history of cancer genomes, based on evolutionary theories and phylogenetic approaches. These methods are expected to be employed for cancer exome/genome sequencing data obtained from a single patient.
Courses Taught
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Selected Publications
Recent
Miura, S., Gomez, K., Murillo, O., Huuki, L., Vu, T., Buturla, T., & Kumar, S. (2018). Predicting clone genotypes from tumor bulk sequencing of multiple samples. Bioinformatics, 34(23), 4017-4026. doi: 10.1093/bioinformatics/bty469.
Miura, S., Huuki, L., Buturla, T., Vu, T., Gomez, K., & Kumar, S. (2018). Computational enhancement of single-cell sequences for inferring tumor evolution. Bioinformatics, 34(17), i917-i926. doi: 10.1093/bioinformatics/bty571.
Gomez, K., Miura, S., Huuki, L., Spell, B., Townsend, J., & Kumar, S. (2018). Somatic evolutionary timings of driver mutations. BMC Cancer, 18(1). doi: 10.1186/s12885-017-3977-y.